Welcome to Tyssue’s documentation!¶
The tyssue
library seeks to provide a unified interface to implement
bio-mechanical models of living tissues, with a focus on epithelium
modeling. It’s main focus is on vertex based models.
- Basic creation and index manipulation
- Visualisation
- Geometries
- Quasistatic Models
- Simple forward Euler solver
- Solving from \(t = 0\) to \(t = 8\)
- Showing the results
- Cell Division
- Type 1 transition
- Apoptosis
- Core objects
- Drawing functions
- Geometry classes
- Topology functions
- Dynamic models definitions
- Epithelium generation utilities
- Input/output
- Collision detection and correction
- Miscellanous utils